Package: haplotyper 0.1

haplotyper: Tool for Clustering Genotypes in Haplotypes

Function to identify haplotypes within QTL (Quantitative Trait Loci). One haplotype is a combination of SNP (Single Nucleotide Polymorphisms) within the QTL. This function groups together all individuals of a population with the same haplotype. Each group contains individual with the same allele in each SNP, whether or not missing data. Thus, haplotyper groups individuals, that to be imputed, have a non-zero probability of having the same alleles in the entire sequence of SNP's. Moreover, haplotyper calculates such probability from relative frequencies.

Authors:Sebastian Simondi <[email protected]> and Gaston Quero, with contributions from Victoria Bonnecarrere and Lucia Gutierrez

haplotyper_0.1.tar.gz
haplotyper_0.1.zip(r-4.5)haplotyper_0.1.zip(r-4.4)haplotyper_0.1.zip(r-4.3)
haplotyper_0.1.tgz(r-4.4-any)haplotyper_0.1.tgz(r-4.3-any)
haplotyper_0.1.tar.gz(r-4.5-noble)haplotyper_0.1.tar.gz(r-4.4-noble)
haplotyper_0.1.tgz(r-4.4-emscripten)haplotyper_0.1.tgz(r-4.3-emscripten)
haplotyper.pdf |haplotyper.html✨
haplotyper/json (API)

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Last updated 8 years agofrom:9537d5ab5f. Checks:OK: 7. Indexed: yes.

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