Package: haplotyper
Type: Package
Title: Tool for Clustering Genotypes in Haplotypes
Version: 0.1
Date: 2016-03-28
Author: Sebastian Simondi <sebastian.simondi@gmail.com> and Gaston
        Quero, with contributions from Victoria Bonnecarrere and Lucia
        Gutierrez
Maintainer: Gaston Quero <gastonquero@gmail.com>
Description: Function to identify haplotypes within QTL (Quantitative
        Trait Loci). One haplotype is a combination of SNP (Single
        Nucleotide Polymorphisms) within the QTL. This function groups
        together all individuals of a population with the same
        haplotype. Each group contains individual with the same allele
        in each SNP, whether or not missing data. Thus, haplotyper
        groups individuals, that to be imputed, have a non-zero
        probability of having the same alleles in the entire sequence
        of SNP's. Moreover, haplotyper calculates such probability from
        relative frequencies.
Depends: R (>= 2.10)
License: GPL-3
LazyData: TRUE
RoxygenNote: 5.0.1
Suggests: knitr, rmarkdown, testthat
VignetteBuilder: knitr
Imports: graphics, utils
NeedsCompilation: no
Packaged: 2026-10-04 08:41:03 UTC; root
Repository: https://gastonquero.r-universe.dev
Date/Publication: 2016-04-06 17:23:47 UTC
RemoteUrl: https://github.com/cran/haplotyper
RemoteRef: HEAD
RemoteSha: 9537d5ab5f33d18d503909fb60d6e5ae1d222ead